Neuronal activity regulates alternative exon usage

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Computational Detection of Alternative Exon Usage

BACKGROUND With the advent of the GeneChip Exon Arrays, it is now possible to extract "exon-level" expression estimates, allowing for detection of alternative splicing events, one of the primary mechanisms of transcript diversity. In the context of (1) a complex trait use case and (2) a human cerebellum vs. heart comparison on previously validated data, we present a transcript-based statistical...

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Chromatin modifications are critical for the establishment and maintenance of differentiation programs. G9a, the enzyme responsible for histone H3 lysine 9 dimethylation in mammalian euchromatin, exists as two isoforms with differential inclusion of exon 10 (E10) through alternative splicing. We find that the G9a methyltransferase is required for differentiation of the mouse neuronal cell line ...

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ژورنال

عنوان ژورنال: Molecular Brain

سال: 2020

ISSN: 1756-6606

DOI: 10.1186/s13041-020-00685-3